Plot the tree and imports — plotImports • DetectImports

Plot the tree and imports

plotImports(
  tree,
  imports = c(),
  show.axis = T,
  colorBase = "black",
  colorImports = "red",
  colorDescendants = "blue",
  ...
)

Arguments

tree: Phylogenetic tree, object of class phylo
imports: Vector containing the indexes of imported tips
show.axis: Whether or not to show the time axis
colorBase: Base branch color
colorImports: Color for imports
colorDescendants: Color for the local descendants of imports
...: Additional parameters are passed on to the plot.phylo function

Value

Plot of the tree with colored imports